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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36481154_36481470_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36481154 - 36481470

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

TCTACACGTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTACAC

U12 Branch Point Sequence:

TCTGCTTCTACA

Flanking Amino Acid:

EDTVQFRVSMEPTWLQQAPR

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

64.8

35.1

Major BPS

60.3

0.26

1.1

68.9

36.5

Major PPT

57.4

0.17

1.1

56.3

38.1

Minor 5ss

28.8

-2.4

36.8

Minor BPS

48.6

-0.1

62.97

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042751

36470745 - 36482051

11307