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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36499057_36501179_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36499057 - 36501179

Intron Length:

2123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTACTAAATGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTCCCCTGACA

Flanking Amino Acid:

EAHAEEVHEPAPPPVHEPEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.5

30.7

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

54.9

0.11

1.1

54.5

38.4

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

68.1

0.56

1.7

81.48

32.9

Associated Gene:

Gene:

TNNT3

Ensembl Gene ID:

ENSAPLG00000011980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026755

36481858 - 36504963

23106