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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36504000_36504841_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
36504000 - 36504841

Intron Length:
842

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTGGGTATC

5'SS Class:
major

3'SS Sequence:
TGCCGCATCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAT

U12 Branch Point Sequence:
TTCCATCTCATT

Flanking Amino Acid:
RVSAEVWGFHTAEVHEEAHE

Intron Amino Acid Position:
31

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.8
0.35
1.1
66.3
39.5

Major BPS
86.1
0.9
0.7
85.7
22.9

Major PPT
64.7
0.33
0.9
54.3
40.2

Minor 5ss
35.6
-1.6
3.2
50.3
40.4

Minor BPS
42.3
-0.5
2.1
62.59
41.9

Associated Gene:

Gene:
TNNT3

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36481858 - 36504963
23106

36482836 - 36504963
22128

36481858 - 36504963
23106