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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36520255_36527145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36520255 - 36527145

Intron Length:

6891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TGCTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAG

U12 Branch Point Sequence:

TCTACCCTAAGC

Flanking Amino Acid:

MEKSYTSEMTMLITVSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

48.3

-0.1

1.5

55.2

38.9

Major PPT

82.1

0.72

0.8

73.3

37.2

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

52.9

0.07

67.97

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029024

36514759 - 36528759

14001