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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36532878_36533578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36532878 - 36533578

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTGTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

AGCTGCTGACTC

Flanking Amino Acid:

GSTKPETNIKSTPSGKKYKF

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

73.4

0.53

65.2

41.1

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

-0.5

49.93

40.9

Associated Gene:

Gene:

LSP1

Ensembl Gene ID:

ENSAPLG00000011632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012143

36532788 - 36561976

29189