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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36534904_36535049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36534904 - 36535049

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTCCA

5'SS Class:

major

3'SS Sequence:

CTCCTCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

ATCACCTCATTC

Flanking Amino Acid:

TESLNRSIKKSNSIKKSQPP

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.1

64.6

41.3

Major BPS

73.5

0.58

73.6

32.5

Major PPT

76.6

0.6

0.7

68.6

31.8

Minor 5ss

33.5

-1.9

43.7

Minor BPS

47.9

-0.1

1.8

57.74

41.3

Associated Gene:

Gene:

LSP1

Ensembl Gene ID:

ENSAPLG00000011632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034612

36534316 - 36561976

27661

ENSAPLT00000012143

36532788 - 36561976

29189