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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36535129_36538460_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36535129 - 36538460

Intron Length:

3332

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCCCGGAGG

5'SS Class:

major

3'SS Sequence:

GAGGCCCATAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTACAT

U12 Branch Point Sequence:

GTGACCTACATC

Flanking Amino Acid:

KLEQIQLDREKMLTPVSSLP

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.2

55.8

41.4

Major BPS

57.8

0.2

1.1

66.6

38.6

Major PPT

-0.3

1.7

39.5

39.2

Minor 5ss

17.4

-3.8

3.6

30.1

Minor BPS

45.5

-0.3

2.1

55.35

43.3

Associated Gene:

Gene:

LSP1

Ensembl Gene ID:

ENSAPLG00000011632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034612

36534316 - 36561976

27661