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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36538547_36540792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36538547 - 36540792

Intron Length:

2246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GCTTCTTTGACC

Flanking Amino Acid:

WSQKLEQRKQRSPRQSYEEE

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.8

38.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

62.4

0.28

0.8

53.4

31.1

Minor 5ss

29.7

-2.3

2.6

33.4

41.8

Minor BPS

73.3

0.72

1.2

74.18

Associated Gene:

Gene:

LSP1

Ensembl Gene ID:

ENSAPLG00000011632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034612

36534316 - 36561976

27661

ENSAPLT00000012143

36532788 - 36561976

29189