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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36540883_36543121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36540883 - 36543121

Intron Length:

2239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

TGCTATGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTCGTCCTAATT

Flanking Amino Acid:

SESAGSAQENHYDFKPSGPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

74.8

35.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

76.3

0.59

72.8

Minor 5ss

37.3

-1.4

3.1

55.2

42.8

Minor BPS

57.1

0.3

1.8

75.59

41.9

Associated Gene:

Gene:

LSP1

Ensembl Gene ID:

ENSAPLG00000011632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034612

36534316 - 36561976

27661

ENSAPLT00000012143

36532788 - 36561976

29189