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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36584634_36585698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36584634 - 36585698

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTCAATCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

CTTTGCTCAATC

Flanking Amino Acid:

RTDVCNALRRGVSAALVFQQ

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.4

39.2

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

68.3

0.41

0.9

60.8

34.8

Minor 5ss

32.3

-2

3.2

43.8

43.9

Minor BPS

56.5

0.18

70.19

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011549

36583040 - 36586708

3669