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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36602682_36603422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36602682 - 36603422

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTGTTTTCATTT

Flanking Amino Acid:

IGAKPLIKGQYVIPCEKVSS

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

100

1.24

0.5

100

Major PPT

0.79

0.8

82.2

34.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

47.2

-0.1

1.7

62.66

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017674

36592467 - 36605186

12720

ENSAPLT00000010459

36592675 - 36605422

12748