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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36603522_36604070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36603522 - 36604070

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCGTTCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

TGTGGCTGAAGT

Flanking Amino Acid:

QLTGEQYVFKVSAQGETICL

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.8

39.1

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

0.58

0.8

69.3

36.9

Minor 5ss

-2.5

2.9

33.4

41.7

Minor BPS

46.9

-0.1

2.2

69.32

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017674

36592467 - 36605186

12720

ENSAPLT00000010459

36592675 - 36605422

12748