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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36622456_36634002_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
36622456 - 36634002

Intron Length:
11547

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTCAGTGCG

5'SS Class:
major

3'SS Sequence:
CCTCTCCCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTGAC

U12 Branch Point Sequence:
GCCACCTGACCG

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.5
0.46
1.3
60.8
42.6

Major BPS
60.1
0.25
1
51
35.6

Major PPT
78.7
0.64
0.7
69.4
31.3

Minor 5ss
28
-2.5
2.9
25.3
36.2

Minor BPS
45.3
-0.4
1.9
45.55
46.4

Associated Gene:

Gene:
DUSP8

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36622253 - 36657416
35164