Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_36647702_36653401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36647702 - 36653401

Intron Length:

5700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTCAG

5'SS Class:

major

3'SS Sequence:

GTTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

GTGAGCTCAATG

Flanking Amino Acid:

RRMKESRDMRGGFATFSSCF

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

62.7

43.2

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

86.8

0.83

0.7

81.5

30.6

Minor 5ss

-1.6

2.6

41.2

45.2

Minor BPS

45.2

-0.5

49.07

44.7

Associated Gene:

Gene:

DUSP8

Ensembl Gene ID:

ENSAPLG00000009896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019890

36646767 - 36657416

10650