Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_36655593_36655791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36655593 - 36655791

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TACCTTGCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAA

U12 Branch Point Sequence:

TTTCCTCTACCT

Flanking Amino Acid:

PWLDKSIEFIDKAKVSSCQV

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

76.6

34.9

Major BPS

66.5

0.41

1.1

68.2

37.5

Major PPT

74.3

0.55

0.9

65.4

40.8

Minor 5ss

44.5

-0.6

3.1

61.3

44.6

Minor BPS

56.7

0.29

82.08

39.3

Associated Gene:

Gene:

DUSP8

Ensembl Gene ID:

ENSAPLG00000009896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019890

36646767 - 36657416

10650

ENSAPLT00000010312

36622253 - 36657416

35164