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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36828122_36830111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36828122 - 36830111

Intron Length:

1990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CAACCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTGCCAACCT

Flanking Amino Acid:

KADIVHAFLSIPSLSHSVIS

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.2

43.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

69.4

0.44

65.1

40.6

Minor 5ss

-1.8

2.9

42.1

44.4

Minor BPS

45.2

-0.2

2.5

76.24

46.2

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009832

36789647 - 37102032

312386

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000047976

36788647 - 37102032

313386

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047066

36788647 - 37102032

313386

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044466

36804516 - 37103380

298865