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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36836597_36837850_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36836597 - 36837850

Intron Length:

1254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CATGCATGGGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TGTGCATGCATG

Flanking Amino Acid:

SPRFHRRKLQVPTPEEMSNL

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.8

1.03

0.7

89.6

22.7

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

55.6

0.13

1.1

50.5

42.6

Minor 5ss

32.9

-1.9

2.7

43.2

43.8

Minor BPS

41.5

-0.8

2.2

50.06

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047066

36788647 - 37102032

313386

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044466

36804516 - 37103380

298865

ENSAPLT00000009832

36789647 - 37102032

312386

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000047976

36788647 - 37102032

313386