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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36838059_36842336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36838059 - 36842336

Intron Length:

4278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCATCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TAGTACTGACCC

Flanking Amino Acid:

LSTSPLSSPRVTPHPSPRGS

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

67.7

0.4

0.9

60.5

34.1

Minor 5ss

-1.8

3.3

40.9

45.4

Minor BPS

48.5

-0.1

1.9

61.68

43.1

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044466

36804516 - 37103380

298865

ENSAPLT00000009832

36789647 - 37102032

312386

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000047976

36788647 - 37102032

313386

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047066

36788647 - 37102032

313386