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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36852240_36856177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36852240 - 36856177

Intron Length:

3938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTGCCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

ACACTAGTAACT

Flanking Amino Acid:

RAIEMAQHGQSKTMFSKSLD

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

72.2

39.5

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

67.2

0.39

0.9

61.2

35.1

Minor 5ss

31.9

-2.1

3.2

43.3

44.4

Minor BPS

44.6

-0.3

2.2

61.49

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000047066

36788647 - 37102032

313386

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000009832

36789647 - 37102032

312386

ENSAPLT00000044466

36804516 - 37103380

298865

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047976

36788647 - 37102032

313386