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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36862294_36867038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36862294 - 36867038

Intron Length:

4745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCTCTCTCATTT

Flanking Amino Acid:

LEHIQKHIWYIGGKNEPEPE

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

86.3

0.82

0.7

24.1

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

49.4

0.03

1.8

68.97

42.5

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000047976

36788647 - 37102032

313386

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047066

36788647 - 37102032

313386

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044466

36804516 - 37103380

298865