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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36867071_36875076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36867071 - 36875076

Intron Length:

8006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

TTTTACAGAGCT

Flanking Amino Acid:

IEVDASKRLTLEHIQKHIWY

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.8

44.6

Major BPS

0.42

1.1

38.5

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

33.4

-1.9

2.9

41.5

44.6

Minor BPS

2.1

79.62

41.5

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044466

36804516 - 37103380

298865

ENSAPLT00000009832

36789647 - 37102032

312386

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000047976

36788647 - 37102032

313386

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047066

36788647 - 37102032

313386