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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36879400_36888421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36879400 - 36888421

Intron Length:

9022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

GCTCATTCAACT

Flanking Amino Acid:

VGDSLLETSCGSPHYACPEV

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

79.7

0.74

79.6

35.6

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

49.8

0.07

1.7

67.64

42.8

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009832

36789647 - 37102032

312386

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000047976

36788647 - 37102032

313386

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047066

36788647 - 37102032

313386

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044466

36804516 - 37103380

298865