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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36888539_36898485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36888539 - 36898485

Intron Length:

9947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATAATTTAACT

Flanking Amino Acid:

ALDFCHSHSICHRDLKPENL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

91.3

0.93

0.6

86.6

24.3

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

64.5

0.53

1.5

77.76

37.9

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028834

36804670 - 37058536

253867

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000024570

36804670 - 37102032

297363

ENSAPLT00000044466

36804516 - 37103380

298865

ENSAPLT00000009832

36789647 - 37102032

312386

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000047976

36788647 - 37102032

313386

ENSAPLT00000037008

36804516 - 37103380

298865

ENSAPLT00000047066

36788647 - 37102032

313386