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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36958627_37058050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

36958627 - 37058050

Intron Length:

99424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GTTTCTTTCTGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

77.3

0.68

79.3

29.4

Major PPT

83.7

0.76

0.8

77.8

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

-0.6

3.6

71.96

45.3

Associated Gene:

Gene:

BRSK2

Ensembl Gene ID:

ENSAPLG00000009397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044709

36789647 - 37059618

269972

ENSAPLT00000040801

36804516 - 37058536

254021

ENSAPLT00000028834

36804670 - 37058536

253867