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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37258898_37260279_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37258898 - 37260279

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTCAATCAT

5'SS Class:

weak_major

3'SS Sequence:

TAATGGCATTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATTAC

U12 Branch Point Sequence:

ACTCAGATAATG

Flanking Amino Acid:

PGTQMPSKQNYTEIFILSFM

Intron Amino Acid Position:

1162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.05

1.3

56.9

41.8

Major BPS

0.4

1.1

57.8

38.6

Major PPT

46.9

-0.1

1.7

51.7

46.8

Minor 5ss

33.2

-1.9

3.1

47.5

42.3

Minor BPS

39.6

-0.9

2.3

45.11

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011814

37256691 - 37280948

24258