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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37263192_37263528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37263192 - 37263528

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGGTCTCTAACT

Flanking Amino Acid:

CSKSIKVFLGNYELVLSDGR

Intron Amino Acid Position:

887

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.1

0.68

0.8

72.6

37.5

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

66.4

0.59

1.7

81.44

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011814

37256691 - 37280948

24258