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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37264874_37266109_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37264874 - 37266109

Intron Length:

1236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTCATTCAT

5'SS Class:

major

3'SS Sequence:

AAGAAACACAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTCAGT

Flanking Amino Acid:

YKGMPLSPGEIWFISHFSWL

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.7

0.25

1.3

64.5

41.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

44.3

-0.3

1.1

31.4

34.2

Minor 5ss

33.1

-1.9

2.9

42.5

38.1

Minor BPS

58.4

0.34

82.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011814

37256691 - 37280948

24258