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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37267057_37268012_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37267057 - 37268012

Intron Length:
956

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTTGGT

5'SS Class:
major

3'SS Sequence:
CCTCTGTCCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTGAT

U12 Branch Point Sequence:
ATCTGATGATCA

Flanking Amino Acid:
STVNPEVYQKNCMFDTCNCE

Intron Amino Acid Position:
585

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.1
69.2
41.7

Major BPS
82.5
0.81
0.8
71.4
36.6

Major PPT
69.1
0.43
0.8
61.1
35.1

Minor 5ss
33.4
-1.9
3.5
50.3
45.9

Minor BPS
42
-0.6
2.2
55.77
43

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37256691 - 37280948
24258