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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37375761_37376156_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37375761 - 37376156

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCAAATTACTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

AATAACGAAACC

Flanking Amino Acid:

VVVHVAPSFQGKVCGLCGDF

Intron Amino Acid Position:

980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

58.6

0.19

54.4

44.4

Minor 5ss

-1.1

53.2

44.1

Minor BPS

42.4

-0.6

2.3

55.88

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011367

37357493 - 37400419

42927