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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37386970_37387663_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37386970 - 37387663

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGACAT

5'SS Class:

major

3'SS Sequence:

CCACCCACTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

TTCCCTGCCACC

Flanking Amino Acid:

VDHSYQNRTSGLCGNFNNIQ

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

64.3

41.6

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

54.1

0.09

49.5

32.8

Minor 5ss

32.4

-2

3.5

44.2

44.6

Minor BPS

40.5

-0.7

2.4

55.34

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011367

37357493 - 37400419

42927