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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37474220_37474555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37474220 - 37474555

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AGCTCATTAATC

Flanking Amino Acid:

VVLLVDAKKNVVVFKSDGSV

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

0.68

0.9

75.5

38.4

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

62.3

0.36

1.6

66.84

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008425

37456233 - 37482156

25924