Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_37474667_37475232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37474667 - 37475232

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

CTTGTCATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTGATTGGACA

Flanking Amino Acid:

HGDCYYVLAKGTVNDTHALL

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

76.1

0.59

0.9

70.5

34.8

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

49.7

-0

1.8

67.82

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008425

37456233 - 37482156

25924