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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37717632_37721822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

37717632 - 37721822

Intron Length:

4191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTATACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATTTCTTTATAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

88.1

0.86

0.8

84.3

29.6

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

63.3

0.4

1.7

73.99

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038410

37697038 - 37721868

24831