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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37817716_37819175_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
37817716 - 37819175

Intron Length:
1460

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGTCGT

5'SS Class:
strong_major

3'SS Sequence:
TCTTACAATAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
ATATTCTTACTT

Flanking Amino Acid:
NGAKIVATKEWKRNDKIELL

Intron Amino Acid Position:
195

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.7
0.86
0.9
74.5
41.9

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
61.7
0.26
1.1
61.2
38.1

Minor 5ss
36.1
-1.6
3
47.2
43.4

Minor BPS
65.1
0.55
1.6
78.58
38

Associated Gene:

Gene:
KMT5B

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37805704 - 37825992
20289