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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37820036_37820220_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
37820036 - 37820220

Intron Length:
185

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGCAAG

5'SS Class:
strong_major

3'SS Sequence:
TCTTCTTCCCAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTCAT

U12 Branch Point Sequence:
TTCCTGTCATCT

Flanking Amino Acid:
INHDCRPNCKFVSTGRDTAC

Intron Amino Acid Position:
258

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.6
0.93
0.9
77.9
38.6

Major BPS
72.5
0.56
1.2
75
39.9

Major PPT
72.2
0.5
1
71.4
33.4

Minor 5ss
38.7
-1.3
2.8
47.8
47.9

Minor BPS
42.9
-0.4
2.3
64.89
45.6

Associated Gene:

Gene:
KMT5B

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37805704 - 37825992
20289