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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37823157_37824523_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
37823157 - 37824523

Intron Length:
1367

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGTATG

5'SS Class:
strong_major

3'SS Sequence:
CTTTCTTTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTTAAAT

U12 Branch Point Sequence:
GTGTCATTAACA

Flanking Amino Acid:
ADTTQEKANATNRKSSIGVK

Intron Amino Acid Position:
369

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.3
0.88
0.9
84.6
33.2

Major BPS
64.6
0.36
1.3
73.3
39.1

Major PPT
92.1
0.95
0.6
87.8
22.1

Minor 5ss
41.1
-1
2.8
51.8
38.9

Minor BPS
71.4
0.67
1.6
77.71
38.7

Associated Gene:

Gene:
KMT5B

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

37805704 - 37825992
20289