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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37867179_37870811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37867179 - 37870811

Intron Length:

3633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATG

Flanking Amino Acid:

VQSQKENDLQGAEAMVLESV

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.6

0.55

1.1

77.2

35.1

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

72.1

0.55

1.2

71.21

36.3

Associated Gene:

Gene:

CHKA

Ensembl Gene ID:

ENSAPLG00000008912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009283

37856325 - 37876801

20477