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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37872365_37873975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37872365 - 37873975

Intron Length:

1611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TTACCATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TCTTGCTTAATA

Flanking Amino Acid:

VVFCHNDCQEGNVLLLEGRE

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

75.9

0.64

66.1

40.5

Major PPT

76.6

0.6

0.8

74.3

35.1

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

71.2

0.66

1.7

78.78

38.5

Associated Gene:

Gene:

CHKA

Ensembl Gene ID:

ENSAPLG00000008912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009283

37856325 - 37876801

20477