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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37874064_37874957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37874064 - 37874957

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAACCCAT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TAGTGTGTAAAT

Flanking Amino Acid:

IDFEYSSYNYRGFDIGNHFC

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

60.1

46.2

Major BPS

0.3

62.3

30.4

Major PPT

96.1

1.04

0.5

95.6

14.9

Minor 5ss

45.6

-0.5

65.8

45.3

Minor BPS

44.9

-0.3

2.4

65.78

44.9

Associated Gene:

Gene:

CHKA

Ensembl Gene ID:

ENSAPLG00000008912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009283

37856325 - 37876801

20477