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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37875653_37875911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37875653 - 37875911

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCTTGGTAAATA

Flanking Amino Acid:

LEEEMLIEVNRFALASHFFW

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.4

32.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

81.2

0.7

0.9

77.9

35.1

Minor 5ss

-0.4

2.6

61.1

43.8

Minor BPS

44.5

-0.4

2.6

62.11

45.1

Associated Gene:

Gene:

CHKA

Ensembl Gene ID:

ENSAPLG00000008912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009283

37856325 - 37876801

20477