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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37875994_37876741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37875994 - 37876741

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

CATTCCTTATTT

Flanking Amino Acid:

KISSIEFGYLEYALSRFDAY

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

32.3

Major BPS

78.8

0.72

67.9

40.1

Major PPT

80.5

0.69

0.8

37.2

Minor 5ss

40.7

-1

3.1

54.8

43.3

Minor BPS

69.5

0.69

1.6

80.93

41.2

Associated Gene:

Gene:

CHKA

Ensembl Gene ID:

ENSAPLG00000008912

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009283

37856325 - 37876801

20477