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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37905667_37905790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37905667 - 37905790

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGAAAT

U12 Branch Point Sequence:

AAATTCCCACTC

Flanking Amino Acid:

LHPNCNIHSLWLGNCDLTAA

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.2

39.3

Major BPS

54.8

0.12

1.3

62.7

40.5

Major PPT

80.4

0.69

0.7

77.1

24.9

Minor 5ss

29.7

-2.3

3.5

37.8

42.4

Minor BPS

40.8

-0.7

1.9

47.57

35.4

Associated Gene:

Gene:

RNH1

Ensembl Gene ID:

ENSAPLG00000009242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009645

37905013 - 37909431

4419