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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37907514_37908272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37907514 - 37908272

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGAAG

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

GCAATTCAAACT

Flanking Amino Acid:

VEASCNLELLHLENCGITSD

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.6

42.3

Major BPS

74.2

0.6

0.9

75.7

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

33.8

-1.8

3.2

45.2

43.7

Minor BPS

42.2

-0.5

1.9

54.21

41.4

Associated Gene:

Gene:

RNH1

Ensembl Gene ID:

ENSAPLG00000009242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009645

37905013 - 37909431

4419