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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37908444_37909063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37908444 - 37909063

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGAGAC

U12 Branch Point Sequence:

TTTTTTTTGCCT

Flanking Amino Acid:

MNPNCKLQKLQLEYCELTAD

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

45.6

-0.2

1.2

38.1

41.7

Major PPT

0.9

0.6

22.5

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

48.7

-0

3.5

85.97

34.5

Associated Gene:

Gene:

RNH1

Ensembl Gene ID:

ENSAPLG00000009242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009645

37905013 - 37909431

4419