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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37957296_37967939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

37957296 - 37967939

Intron Length:

10644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCTTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

AGCTCACCGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

76.5

38.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

78.3

0.64

0.8

72.5

32.1

Minor 5ss

33.2

-1.9

2.8

43.4

43.5

Minor BPS

43.2

-0.4

2.1

60.98

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424