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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37974756_37975686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37974756 - 37975686

Intron Length:

931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

CTTGCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

ACCTTGTCACCC

Flanking Amino Acid:

YKVTDRFGFLHEQELPTRTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

69.4

41.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

84.7

0.78

0.8

76.5

37.6

Minor 5ss

39.1

-1.2

57.4

40.4

Minor BPS

40.1

-0.7

2.3

47.6

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377