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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37975727_37976728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37975727 - 37976728

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCACACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTCTTACATT

Flanking Amino Acid:

LPTRTALEEKQKQQEIERVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

67.2

0.39

0.9

59.6

35.5

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

0.33

2.1

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377