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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37976810_37981425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37976810 - 37981425

Intron Length:

4616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

GCTCACATACGT

Flanking Amino Acid:

KWGKYRNSDKMCRRVYKGIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

76.1

0.59

0.9

31.9

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

39.9

-0.6

2.1

56.1

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377