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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37981534_37985660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37981534 - 37985660

Intron Length:

4127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCTC

5'SS Class:

major

3'SS Sequence:

CTCTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATGAC

U12 Branch Point Sequence:

TTCTTCTCCTCT

Flanking Amino Acid:

MKKENEGKYEQMKEQAKSLS

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

0.17

1.3

51.4

43.9

Major PPT

81.8

0.71

0.7

72.9

31.9

Minor 5ss

34.2

-1.8

3.6

50.1

46.4

Minor BPS

39.3

-0.7

3.6

71.23

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377