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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37985771_37986097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37985771 - 37986097

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TTCATTTTAGTG

Flanking Amino Acid:

HIMFRDRYGVKQQALFHVLS

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.7

30.1

Major BPS

0.65

1.1

77.4

37.3

Major PPT

84.1

0.77

0.7

31.7

Minor 5ss

33.3

-1.9

2.7

38.5

32.5

Minor BPS

49.3

-0.1

1.6

54.87

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377